SEngine uses 3D cancer cell organoids grown from patient tumor samples to test more than a hundred drugs at once for efficacy against each patient's unique cancer.. Source: SEngine
SEngine uses 3D cancer cell organoids grown from patient tumor samples to test more than a hundred drugs at once for efficacy against each patient's unique cancer.. Source: SEngine

SEngine Precision Medicine, a spinoff of the Fred Hutchinson Cancer Research Center, has received a $3.1 million grant for the National Institutes of Health (NIH) to study its PARIS assay which can test hundreds of potential therapeutics at a time on living 3D cancer tumors grown directly from patients’ tissues.

The grant will be spread among SEngine and its two research partners Fred Hutch and the Knight Cancer Institute at Oregon Health & Science University (OHSU), which will conduct studies to help commercialize the SEngine testing technology.

“The goal of this grant is to make the testing broadly available to patients and the oncologists who treat them throughout the United States,” said SEngine Precision Medicine Founder and CEO Carla Grandori, M.D., Ph.D. “You can think of us as a search engine for treatments, hence the name SEngine. We arrived at this point only with the collaborative effort involving teams at the Fred Hutch, as well as Seattle Cancer Care Alliance oncologists, Providence Health Services, and Dr. Brian Druker at OHSU.”

The PARIS testing method employs robotics to allow SEngine to test more than a hundred drugs directly on a patients tumor tissue. According to information from the company, early results indicate the company can identify a targeted therapy for a patient 75% of the time. Currently, the test is most appropriate for difficult-to-treat cancers and for patients who have not responded to first-line treatments, note Grandori.

A key element of the SEngine’s testing method is using a patient’s tissue sample to grow living cancer cells from the original tumor, then screen cancer drugs directly against these living cells.

“It’s somewhat ironic that in looking for ways to destroy cancer, we first need to find ways to keep it alive,” said Christopher Kemp, M.D., a cancer geneticist and pioneer of functional genomics at Fred Hutch. “But that’s what it takes to get testing out of patients’ bodies and into the lab. We’re delighted to be working with SEngine.” 

According to the information provided by the company, it operates the only Clinical Laboratory Improvement Amendments (CLIA) certification for a high throughput, high complexity test for solid tumors in the U.S. In instances where the sample provides enough tissue for testing, SEngine returns results in as little as one week. When it needs to grow more cancer cells—cancer organoids—from the tumor, results are typically returned within three weeks.

“The SEngine test includes major innovations: The derivation of cancer organoids, the testing of the broadest collection of targeted drugs, and a strong statistical and bioinformatics component,” said Grandori in a company video describing the PARIS test. “By directly testing the drugs to find which drugs kill, and which don’t kill a particular cancer, SEngine PARIS test increases the likelihood of selecting the best treatment options.

In addition to serving as a precision medicine diagnostic tool for oncologists, SEngine also provides its testing service to pharmaceutical companies for testing of their drug candidates. In addition, the company has validated and patented novel therapeutic targets that it contends DNA sequencing alone can not identify. It’s drug target discovery strategy “integrates the concept of ‘synthetic lethality’ to tackle ‘undruggable’ oncogenes and loss of tumor suppressor function.  

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